\\ \\ **Bioinformatics project at CNR Piedmont Research Area.** \\ \\ //The open-source community helped us to build on our project and this site is our thanks, of course at disposal of the open-source community.// \\ \\ **__Infrastructure for bioinformatics applications__** \\ * **KVM Hypervisor** * Basic KVM server installation (see [[http://dev.digibess.it/doku.php?id=hypervisor:start|KVM @ DigiBESS Dev site]]) * ... * [[rxr:start|Virtual server for applications]] (Ubuntu 16.04 - code name RachaelXReloaded) * [[rxr:bases|Install base system]] * [[rxr:blast|Install Blast+]] * [[rxr:errest|R, RStudio server]] * [[rxr:bowtie|Bowtie and Bowtie2]] * [[rxr:tophat|Samtools, Tophat and Tophat2]] * [[rxr:bwa|BWA]] * [[rxr:bioperl|Bioperl]] * [[rxr:mira|Mira]] * [[rxr:trinity|Trinity]] * [[rxr:rsem|RSEM]] * [[rxr:allpathlg|AllPaths-LG]] * [[rxr:moretools|More tools]] \\ \\ * [[rachaelx:start|Virtual server for applications]] (Ubuntu 12.04 - code name RachaelX) \\ \\ * [[rachael:start|Virtual server for applications (Qiime virtualbox image)]] (Ubuntu 12.04 - code name Rachael) \\ \\ **__V2P2 Repository__** \\ Moved to new ([[http://v2p2dev.to.cnr.it/doku.php|V2P2 Dev Site]]) \\ \\ **__Reference Documentation:__** * **//"Step by step installation guide of a virtual server for bio applications from scratch"//**, Rapporto Tecnico N.49, dicembre 2013, Ceris-CNR ([[http://www.digibess.it/fedora/repository/openbess:TO094-00290|PDF]]) \\ \\ \\ **__More projects:__** * **//"DigiBESS."//** ([[http://dev.digibess.it/doku.php|Site]])