|
|
RachaelX processing statistics
| user | time (hh:mm) | software | db | cores | # seq | notes |
| simona | 198:35 | blastx | nr | 25 | 115917 | |
| simona | 01:15 | blastx | nr | 40 | 1776 | |
| simona | 01:15 | blastx | nr | 40 | 870 | |
| stefano | 102:57 | blastx | ref_seq pr | 12 | 29169 | |
| stefano | 130:30 | blastx | ref_seq pr | 12 | 34885 | |
| stefano | 128:46 | blastx | ref_seq pr | 12 | 38443 | |
| stefano | 136:36 | blastx | ref_seq pr | 12 | 35196 | |
| stefano | 86:27 | blastx | ref_seq pr | 30 | 49436 | |
| stefano | 56:27 | blastx | ref_seq pr | 50 | 43461 | |
| stefano | 136:34 | blastx | ref_seq pr | 25 | 92000 | |
| stefano | 54:35 | blastp | ref_seq pr | 25 | 30282 | |
| simona | 02:50 | blastp | nr | 25 | 4177 | |
| simona | 01:56 | blastp | ref_seq pr | 25 | 4177 | |
| simona | 00:50 | blastp | nr | 40 | 871 | |
| simona | 00:01 | blastn | nt | 40 | 1380 | |
| simona | 02:55 | mira 3.9.9 | | 40 | paired-end 597074 | job = genome,denovo,accurate SOLEXA_SETTINGS -highlyrepetitive |
| simona | 03:10 | mira 3.9.9 | | 40 | paired-end 620661 | job = genome,denovo,accurate SOLEXA_SETTINGS -highlyrepetitive |
| simona | 04:20 | mira 3.9.9 | | 40 | paired-end 620661 | job = genome,denovo,accurate SOLEXA_SETTINGS |
| simona | 02:55 | mira 3.9.9 | | 40 | paired-end 597074 | job = genome,denovo,accurate SOLEXA_SETTINGS |
| simona | 00:10 | mira 3.9.9 | | 40 | paired-end 87426 | job = genome,denovo,accurate SOLEXA_SETTINGS -highlyrepetitive |
| simona | 20:00 | mira 3.9.18 | | 20 | paired-end 781569 | job = genome,denovo,accurate PacBio |
| | | | | | | |
| simona | 2448:00 | PacBioToCA | | merylThreads=25 | 781569 PacBio | correction of PacBio seqs by Illumina paired-end seqs |
| | | | | ovlThreads = 2 | | |
| | | | | frgCorrThreads = 10 | | |
| | | | | | | |
|
|
